When identifying recombinants and narrowing the physical interval that
contains 08bdth/spotty gene, I begin with fin- clipping, therefore I must use
- 12-48 Zebrafish from a designated 08bdth tank
- 1 large mouse cage for the 48 fish
- 1 tank net, 1 blue net to retrieve and select the fish
- Individual smaller mouse boxes labeled depending on the amount of fish and wells
- Tricaine Solution and individual mating box to anesthetize the fish
- Tea strainer to retrieve fish from Tricaine
- Petri Dish to clip the tail in
- Razor Blade to clip the tail
- Tooth pics to separate the tail
- 96- Well Plate to put each tail clipping in
Then I begin Lysis for DNA extraction, for this I need:
- 96-well plate with methanol and fin clips
- Pipette tip connected to a vacuum source to remove methanol
- 55 ÂșC incubator to incubate over night
- Lysis Buffer to lyse the cells
The next day, after incubation, I must Create Master Mix. For the master mix, there is a working solution for designated markers. For this I need,
- Stock Solution and working solutions for each marker, for the PCR
- DNA for amplification
- Centrifuge to spin down the well plate with the solution for PCR
- PCR machine used to amplify the DNA
After the PCR reaction, I must create a gel. For the gel electrophoresis, it is essential to have a:
Lastly, I must use the BIO RAD Ultraviolet imaging camera to take pictures of the gel, revealing base pairs. - Gel chamber for seperation and analysis of DNA, RNA, and protein along with other fragments, based on their size and charge.
No comments:
Post a Comment